Dragon · Draco magnificus (Merlinus, 1022)
EBP Reference Genome
Permissions Declared
Openly Accessible Data
Contributors (view full details)
| Metric | Value | Links |
|---|---|---|
| DOI | 10.1234/ebpr23.1010 | |
| bioproject | PRJEB89012 | NCBI · ENA |
| biosample | SAMEA89012345 | NCBI · ENA |
| tolid | rRattus1 | |
| pacbioSampleAccession | SAMEA89012346 | |
| pacbioOrganismPart | tail | |
| hicTolid | rRattus2 | |
| hicSampleAccession | SAMEA89012347 | |
| hicOrganismPart | brain | |
| rnaTolid | rRattus3 | |
| rnaSampleAccession | SAMEA89012348 | |
| rnaOrganismPart | liver | |
| assemblyName | rRattus1.1 | |
| assemblyAccession | GCA_890123456.1 | |
| alternateAccession | GCA_890123457.1 | |
| lengthTotalMb | 2700 | Definition |
| contigCount | 450 | Definition |
| contigN50 | 17 | |
| scaffoldCount | 90 | |
| scaffoldN50 | 63 | Definition |
| longestScaffold | 125 | Definition |
| QV | 60.7 | Definition |
| k_mer | 100 | |
| buscoString | C:96.2%[S:92.2%,D:4.0%],F:2.3%,M:1.5%,n:4,600 eukaryota_odb10 | |
| assemblyPercent | 98.3 | |
| sexChromosomes | XY | |
| lengthMitoKb | 16.9 | |
| lengthPlastidKb | 0 | |
| chromosomeCount | 21 | |
| proteinGeneCount | 21500 | |
| nonCodingCount | 1650 | |
| transcriptCount | 52500 | |
| observedSex | male | |
| pacbioCollectionLocation | Asia | |
| pacbioBasesGb | 47 | |
| pacbioReadsMillions | 4.7 | |
| lrCov | 68 | |
| hicBaseCountGb | 165 | |
| hicReadsMillions | 980 | |
| manualBreaksAndJoins | 17 | |
| manualHaplotigRemovals | 3 | |
| scaffoldLengthChange | 6.3 | |
| scaffoldCountChange | 2 | |
| scaffoldN50Change | 0.6 | |
| gapCount | 260 | |
| autosomesCount | 20 | |
| manualNote | This is a manual note. | |
| buscoLineage | Eukaryota_odb10 | |
| buscoN | 4 | |
| buscoCompleteness | 96.2 | |
| buscoSingle | 92.2 | |
| buscoDuplicated | 4 |
