Large blue butterfly · Phengaris arion (Linnaeus, 1758)

EBP Reference Genome
Permissions Declared
Openly Accessible Data
Metric Value Links
DOI 10.1234/ebpr23.2278
bioproject PRJEB65386 NCBI · ENA
biosample SAMEA112232493 NCBI · ENA
tolid ilPheArio1
pacbioSampleAccession SAMEA112232932
pacbioOrganismPart thorax
hicTolid ilPheArio2
hicSampleAccession SAMEA112232934
hicOrganismPart head
rnaTolid
rnaSampleAccession
rnaOrganismPart
assemblyName ilPheArio1.1
assemblyAccession GCA_963565745.1
alternateAccession GCA_963565765.1
lengthTotalMb 544.5 Definition
contigCount 195 Definition
contigN50 11
scaffoldCount 29
scaffoldN50 24 Definition
longestScaffold 48.13 Definition
QV 61.2 Definition
k_mer 100
buscoString C:97.4%[S:97.0%,D:0.4%],F:0.5%,M:2.1%,n:5,286 eukaryota_odb10
assemblyPercent 99.93
sexChromosomes Z
lengthMitoKb 15.7
lengthPlastidKb 0
chromosomeCount 23
proteinGeneCount 21646
nonCodingCount 1553
transcriptCount 51064
observedSex female
pacbioCollectionLocation East Atlantic
pacbioBasesGb 84.99
pacbioReadsMillions 7.03
lrCov 142
hicBaseCountGb 110.65
hicReadsMillions 732.78
manualBreaksAndJoins 108
manualHaplotigRemovals 3
scaffoldLengthChange 76
scaffoldCountChange 2
scaffoldN50Change 0.21
gapCount 165
autosomesCount 22
manualNote This is a manual note.
buscoLineage Eukaryota_odb10
buscoN 5
buscoCompleteness 97.4
buscoSingle 97
buscoDuplicated 0.4
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This work has been supported by the Wellcome Sanger Insitute and Arizona State University.