Centaur · Centaurus bipedalis (Merlinus, 1022)
EBP Reference Genome
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Openly Accessible Data
Contributors (view full details)
| Metric | Value | Links |
|---|---|---|
| DOI | 10.1234/ebpr23.1414 | |
| bioproject | PRJEB23456 | NCBI · ENA |
| biosample | SAMEA23456789 | NCBI · ENA |
| tolid | cCenBip1 | |
| pacbioSampleAccession | SAMEA23456790 | |
| pacbioOrganismPart | skin | |
| hicTolid | cCenBip2 | |
| hicSampleAccession | SAMEA23456791 | |
| hicOrganismPart | blood | |
| rnaTolid | cCenBip3 | |
| rnaSampleAccession | SAMEA23456792 | |
| rnaOrganismPart | liver | |
| assemblyName | cCenBip1.1 | |
| assemblyAccession | GCA_234567890.1 | |
| alternateAccession | GCA_234567891.1 | |
| lengthTotalMb | 1900 | Definition |
| contigCount | 380 | Definition |
| contigN50 | 16 | |
| scaffoldCount | 80 | |
| scaffoldN50 | 60 | Definition |
| longestScaffold | 118 | Definition |
| QV | 62.1 | Definition |
| k_mer | 100 | |
| buscoString | C:98.0%[S:94.0%,D:4.0%],F:2.1%,M:0.1%,n:5,000 eukaryota_odb10 | |
| assemblyPercent | 99.5 | |
| sexChromosomes | ZW | |
| lengthMitoKb | 17.2 | |
| lengthPlastidKb | 0 | |
| chromosomeCount | 24 | |
| proteinGeneCount | 22800 | |
| nonCodingCount | 1780 | |
| transcriptCount | 53800 | |
| observedSex | female | |
| pacbioCollectionLocation | South America | |
| pacbioBasesGb | 60 | |
| pacbioReadsMillions | 6 | |
| lrCov | 80 | |
| hicBaseCountGb | 178 | |
| hicReadsMillions | 1100 | |
| manualBreaksAndJoins | 24 | |
| manualHaplotigRemovals | 4 | |
| scaffoldLengthChange | 7.4 | |
| scaffoldCountChange | 3 | |
| scaffoldN50Change | 0.7 | |
| gapCount | 340 | |
| autosomesCount | 23 | |
| manualNote | This is a manual note. | |
| buscoLineage | Eukaryota_odb10 | |
| buscoN | 5 | |
| buscoCompleteness | 98 | |
| buscoSingle | 94 | |
| buscoDuplicated | 4 |
