Barn owl · Tyto alba (Scopoli, 1769)
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| Metric | Value | Links |
|---|---|---|
| DOI | 10.1234/ebpr23.7777 | |
| bioproject | PRJEB56789 | NCBI · ENA |
| biosample | SAMEA56789012 | NCBI · ENA |
| tolid | tAlbAlb1 | |
| pacbioSampleAccession | SAMEA56789013 | |
| pacbioOrganismPart | feather | |
| hicTolid | tAlbAlb2 | |
| hicSampleAccession | SAMEA56789014 | |
| hicOrganismPart | blood | |
| rnaTolid | tAlbAlb3 | |
| rnaSampleAccession | SAMEA56789015 | |
| rnaOrganismPart | liver | |
| assemblyName | tAlbAlb1.1 | |
| assemblyAccession | GCA_567890123.1 | |
| alternateAccession | GCA_567890124.1 | |
| lengthTotalMb | 1500 | Definition |
| contigCount | 300 | Definition |
| contigN50 | 12 | |
| scaffoldCount | 60 | |
| scaffoldN50 | 55 | Definition |
| longestScaffold | 110 | Definition |
| QV | 48.5 | Definition |
| k_mer | 100 | |
| buscoString | C:97.5%[S:93.5%,D:4.0%],F:2.0%,M:0.5%,n:4,500 eukaryota_odb10 | |
| assemblyPercent | 99 | |
| sexChromosomes | ZW | |
| lengthMitoKb | 16.7 | |
| lengthPlastidKb | 0 | |
| chromosomeCount | 24 | |
| proteinGeneCount | 22000 | |
| nonCodingCount | 1700 | |
| transcriptCount | 53000 | |
| observedSex | female | |
| pacbioCollectionLocation | North America | |
| pacbioBasesGb | 55 | |
| pacbioReadsMillions | 5.5 | |
| lrCov | 75 | |
| hicBaseCountGb | 170 | |
| hicReadsMillions | 1050 | |
| manualBreaksAndJoins | 20 | |
| manualHaplotigRemovals | 4 | |
| scaffoldLengthChange | 7 | |
| scaffoldCountChange | 3 | |
| scaffoldN50Change | 0.7 | |
| gapCount | 300 | |
| autosomesCount | 23 | |
| manualNote | This is a manual note. | |
| buscoLineage | Eukaryota_odb10 | |
| buscoN | 5 | |
| buscoCompleteness | 97.5 | |
| buscoSingle | 93.5 | |
| buscoDuplicated | 4 |
